I tried with the 05/04/2010 build: a recent one. But the bug is still the same (exception is thrown on line 641 instead of 638).
my application.xml seems to me fine, about <ejb> declarations.
[#|2010-04-07T22:30:49.312+0200|SEVERE|glassfishv3.0|javax.enterprise.system.core.com.sun.enterprise.v3.server|_ThreadID=64;_ThreadName=Thread-1;|Exception while preparing the app
org.glassfish.deployment.common.DeploymentException
at org.glassfish.javaee.full.deployment.EarDeployer.prepare(EarDeployer.java:149)
at com.sun.enterprise.v3.server.ApplicationLifecycle.prepareModule(ApplicationLifecycle.java:647)
at com.sun.enterprise.v3.server.ApplicationLifecycle.deploy(ApplicationLifecycle.java:299)
at com.sun.enterprise.v3.server.ApplicationLifecycle.deploy(ApplicationLifecycle.java:186)
at org.glassfish.deployment.admin.DeployCommand.execute(DeployCommand.java:276)
at com.sun.enterprise.v3.admin.CommandRunnerImpl$1.execute(CommandRunnerImpl.java:314)
at com.sun.enterprise.v3.admin.CommandRunnerImpl.doCommand(CommandRunnerImpl.java:329)
at com.sun.enterprise.v3.admin.CommandRunnerImpl.doCommand(CommandRunnerImpl.java:832)
at com.sun.enterprise.v3.admin.CommandRunnerImpl.access$900(CommandRunnerImpl.java:85)
at com.sun.enterprise.v3.admin.CommandRunnerImpl$ExecutionContext.execute(CommandRunnerImpl.java:891)
at com.sun.enterprise.v3.admin.CommandRunnerImpl$ExecutionContext.execute(CommandRunnerImpl.java:880)
at org.glassfish.admingui.common.util.LocalDeploymentFacility$LocalDFCommandRunner.run(LocalDeploymentFacility.java:138)
at org.glassfish.deployment.client.AbstractDeploymentFacility.deploy(AbstractDeploymentFacility.java:350)
at org.glassfish.admingui.common.util.DeployUtil.invokeDeploymentFacility(DeployUtil.java:89)
at org.glassfish.admingui.common.util.DeployUtil.deploy(DeployUtil.java:66)
at org.glassfish.admingui.common.handlers.DeploymentHandler.deploy(DeploymentHandler.java:186)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
at java.lang.reflect.Method.invoke(Method.java:597)
at com.sun.jsftemplating.layout.descriptors.handler.Handler.invoke(Handler.java:442)
at com.sun.jsftemplating.layout.descriptors.LayoutElementBase.dispatchHandlers(LayoutElementBase.java:420)
at com.sun.jsftemplating.layout.descriptors.LayoutElementBase.dispatchHandlers(LayoutElementBase.java:394)
at com.sun.jsftemplating.layout.event.CommandActionListener.invokeCommandHandlers(CommandActionListener.java:150)
at com.sun.jsftemplating.layout.event.CommandActionListener.processAction(CommandActionListener.java:98)
at javax.faces.event.ActionEvent.processListener(ActionEvent.java:88)
at javax.faces.component.UIComponentBase.broadcast(UIComponentBase.java:772)
at javax.faces.component.UICommand.broadcast(UICommand.java:300)
at com.sun.webui.jsf.component.WebuiCommand.broadcast(WebuiCommand.java:160)
at javax.faces.component.UIViewRoot.broadcastEvents(UIViewRoot.java:775)
at javax.faces.component.UIViewRoot.processApplication(UIViewRoot.java:1267)
at com.sun.faces.lifecycle.InvokeApplicationPhase.execute(InvokeApplicationPhase.java:82)
at com.sun.faces.lifecycle.Phase.doPhase(Phase.java:101)
at com.sun.faces.lifecycle.LifecycleImpl.execute(LifecycleImpl.java:118)
at javax.faces.webapp.FacesServlet.service(FacesServlet.java:312)
at org.apache.catalina.core.StandardWrapper.service(StandardWrapper.java:1518)
at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:339)
at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:211)
at com.sun.webui.jsf.util.UploadFilter.doFilter(UploadFilter.java:229)
at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:252)
at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:211)
at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:275)
at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:171)
at org.apache.catalina.core.StandardPipeline.doInvoke(StandardPipeline.java:651)
at org.apache.catalina.core.StandardPipeline.invoke(StandardPipeline.java:591)
at com.sun.enterprise.web.WebPipeline.invoke(WebPipeline.java:94)
at com.sun.enterprise.web.PESessionLockingStandardPipeline.invoke(PESessionLockingStandardPipeline.java:87)
at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:158)
at org.apache.catalina.connector.CoyoteAdapter.doService(CoyoteAdapter.java:328)
at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:229)
at com.sun.enterprise.v3.services.impl.ContainerMapper.service(ContainerMapper.java:239)
at com.sun.grizzly.http.ProcessorTask.invokeAdapter(ProcessorTask.java:811)
at com.sun.grizzly.http.ProcessorTask.doProcess(ProcessorTask.java:708)
at com.sun.grizzly.http.ProcessorTask.process(ProcessorTask.java:1017)
at com.sun.grizzly.http.DefaultProtocolFilter.execute(DefaultProtocolFilter.java:171)
at com.sun.grizzly.DefaultProtocolChain.executeProtocolFilter(DefaultProtocolChain.java:135)
at com.sun.grizzly.DefaultProtocolChain.execute(DefaultProtocolChain.java:102)
at com.sun.grizzly.DefaultProtocolChain.execute(DefaultProtocolChain.java:88)
at com.sun.grizzly.http.HttpProtocolChain.execute(HttpProtocolChain.java:76)
at com.sun.grizzly.ProtocolChainContextTask.doCall(ProtocolChainContextTask.java:53)
at com.sun.grizzly.SelectionKeyContextTask.call(SelectionKeyContextTask.java:57)
at com.sun.grizzly.ContextTask.run(ContextTask.java:69)
at com.sun.grizzly.util.AbstractThreadPool$Worker.doWork(AbstractThreadPool.java:526)
at com.sun.grizzly.util.AbstractThreadPool$Worker.run(AbstractThreadPool.java:507)
at java.lang.Thread.run(Thread.java:619)
Caused by: java.lang.NullPointerException
at com.sun.enterprise.v3.server.ApplicationLifecycle.prepareModule(ApplicationLifecycle.java:641)
at org.glassfish.javaee.full.deployment.EarDeployer.prepareBundle(EarDeployer.java:270)
at org.glassfish.javaee.full.deployment.EarDeployer.access$200(EarDeployer.java:80)
at org.glassfish.javaee.full.deployment.EarDeployer$1.doBundle(EarDeployer.java:132)
at org.glassfish.javaee.full.deployment.EarDeployer$1.doBundle(EarDeployer.java:130)
at org.glassfish.javaee.full.deployment.EarDeployer.doOnBundles(EarDeployer.java:198)
at org.glassfish.javaee.full.deployment.EarDeployer.doOnAllBundles(EarDeployer.java:249)
at org.glassfish.javaee.full.deployment.EarDeployer.prepare(EarDeployer.java:130)
... 64 more
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