From: <glassfish_at_javadesktop.org>
Date: Sat, 12 Jul 2008 05:26:31 PDT

Hi all!
Stating from line 104:
<echo file="${adminpassfile}" append="false">AS_ADMIN_ADMINPASSWORD=${admin.password}</echo>
    <echo file="${adminpassfile}" append="true">${line.separator}</echo>
    <echo file="${adminpassfile}" append="true">AS_ADMIN_MASTERPASSWORD=${master.password}</echo>
    <echo file="${adminpassfile}" append="true">${line.separator}</echo>
    <echo file="${adminpassfile}" append="[b]false[/b]">AS_ADMIN_PASSWORD=${admin.password}</echo>
In result passwordfile contain only one line. Masster password always set to default value and you can't change master password at setup time.
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http://forums.java.net/jive/thread.jspa?messageID=286143